Office: Delta D-168       Email: Hisham@uhcl.edu

Tel: (281) 283-3802     Secretary: (281) 283-3860


Research interests:  - Natural language processing: context-based spelling errors, text mining, text categorization, machine learning, data mining.   - Bioinformatics: Gene selection, Biomedical term classification and disambiguation, Biomedical concept similarity, gene and GO term similarity.

- Publications      

- short bio


Intl. J. of Rapid Manufacturing Special issue on Data Mining and Knowledge Management


Teaching:

o Fall 2009

§ CSCI 3331 Computer Organization and Assembly Language

§ CSCI 4931 Advanced Software Development with Java

§ CSCI 5132 Internet Protocols


Selected Services

- Program Chair (conferences):  SEDE-2008 ; SEDE-2009; BICoB-2010

- Program Committee Member: (selected conferences)

ACM SAC-2010 (DTTA); ACM SAC-2009 (DTTA); PAKDD-2009 (Thailand); KDIR-2009 (Portugal);

SIAM SDM-2008; IEEE BIBE 2008; IEEE WCCI/CEC-2008 (Hong Kong); IEEE CDS-2007(Toronto, Canada);

IEEE 2007 CEC (Singapore); ACIT-2003 (Egypt); ITNG-2007; IEEE BIBE 2007; BMEI-2008(China);


MS Thesis Supervised:

- Noushin Ghaffari: Exploring Machine Learning and Text Mining in Information Extraction Using Gene Expression Profiles and Biomedical Literature. April 2006.

- Hoa A. Nguyen: New Semantic Similarity Techniques Applied in the Biomedical Domain and WordNet. November 2006 {implementation: http://search.cpan.org/~btmcinnes/UMLS-Similarity-0.17/lib/UMLS/Similarity/nam.pm }

- Duc Duong: Using Text Mining to Extract Gene and Protein Synonyms from Biomedical Texts. July 2007

- Elham Khabiri: Using Semantic Similarity Measures in the Biomedical Domain for Functional Similarity of Genes based on Gene Ontology. November 2007

- Anurag Nagar: Functional Analysis of Genes Using the Gene Ontology: Gene Similarity, Clustering,

and Classification. April 2008.

­­­­­­­­­­­­­­­­­­­­____________________________________________________________________________________________

Editor:

- Proceedings of the 16th Intl. conference on Software Engineering and Data Engineering SEDE-2007, Las Vegas, NV, USA.

- Proceedings of SEDE-2008, Los Angeles, CA, USA.

- Proceedings of SEDE-2009, June 2009, Las Vegas, NV USA.

- Intl J. of Rapid Manufacturing (IJRapidM), Special Issue on Data Mining and Knowledge Management. September 2010. http://www.inderscience.com/browse/callpaper.php?callID=1135

Conference Chair:

§  Program co-chair of SEDE-2007: 16th Int’l conference on Software Engineering and Data Engineering, Las Vegas, USA, July 2007.

§  Program co-chair of SEDE-2008, Los Angeles, USA, July 2008.

§  Program co-chair of SEDE-2009, Las Vegas, USA, July 2009.

§  Program chair: BICoB-2010 2nd International Conference on Bioinformatics and Computational Biology, to be held in Hawaii, March 2010. http://sce.uhcl.edu/bicob10/ 


Education

§  B.Sc. Computer Science, University of Jordan.

§  M.S., Computer Science, University of Texas at Dallas.

§  Ph.D., Computer Science (Distinguished dissertation award),

University of Texas at Dallas, August 2000


Photos from SEDE-2007 in Las Vegas


UHCL Computing labs

UHCL Neumann Library

University computing and telecomm


Photos


Projects

- UMLS-Similarity-0.17 > UMLS::Similarity::nam:

http://search.cpan.org/~btmcinnes/UMLS-Similarity-0.17/lib/UMLS/Similarity/nam.pm

- BioMiner

- BioMedSim(semantic similarity of biomedical terms)

- Ltest

- TC

- SemSim


Links

Top US Computing Programs (Comm. ACM June 2007)

The World's Computer Society (IEEE)

ACM

Top500.org: the top 500 supercomputer sites

Mozilla.org

The Largest Known Prime Numbers

Play Chess online

Chess

Play Chess

Wordplay: Fun with Words

Internet Faxing

sourceforge.net: open source development

Online Ethics for Engineering and Science

How to Get a Phd : A Handbook for Students and Their Supervisors

Activities for ESL students {Study English}

A Text Analysis Tool

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